Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837664.1_cds_XP_016506684.1_19887
CDS Infomation

[gene=LOC107824440] [db_xref=GeneID:107824440] [protein=CAAX prenyl protease 1 homolog] [protein_id=XP_016506684.1] [location=join(14913..14943,16156..16303,16408..16492,16574..16669,18989..19054,19188..19286,19511..19624,19725..19835,21211..21273,26187..26279,28005..28118,29098..29169,29263..29328,29586..29702)] [gbkey=CDS]
Sequence

ATGGCATTTCCATACTTGGAATCCGTTGTCGGTTTCATGATACTAATGTACATATTTGAG
ACATACCTTGATTTACGACAACATGCGGCTCTTAAATTGCCAACACTTCCAAAACCTCTG
GAGGGAGTGATCTGCCAGGAAAAATTCAAGAAGTCCCAGGCGTATAGTCTCGACAAAAGT
AATTTTCATTTTGTCCACGAGTTTGTTACCATATTGATGGACTCTGCCGTACTATATTTC
CGGATATTACCTTGGTTTTGGAAGATATCAGGAGACTTTTTGATATACCTTGGTCTCAAT
GCAGAGAATGAAATATTTCACACACTAGCATTTTTAGCTGGAGTTATGGTTTGGTCGCAG
ATCACTGATTTGCCATTTTCGTTGTATTCAACTTTTGTGATCGAGTCCCGCCATGGTTTC
AACAAGCAAACAGTATGGTTATTCTTCAGAGACATGATCAAAGGAATTGCTTTGGCAATT
GTAATTGGTCCTCCCATTGTTGCTGCCATCATTTTTATAGTACAGAAGGGAGGTCCTTAC
TTGGCCATTTACTTGTGGGGATTTATGCTCGTCCTTTCTCTTGTTATGATGACTCTTTAC
CCTATTCTGATTGCTCCACTTTTCAACAAGTTCACTCCACTTCCGGAAGGAGAACTTAGT
TCGAAGATTGAGAATCTGGCTTCCTCGCTTAAATTTCCCCTAAAGAAGTTGTTTGTGGTT
GATGGGTCCACAAGGTCGAGCCATAGCAATGCATACATGTATGGATTCTTCAAGAACAAA
CGGATTGTCCTCTACGATACACTAATCCAGCAGTGCAAGAATGATGAGGAGGTTGTTGCT
GTTATTGCGCATGAGCTGGGGCACTGGAAACTTAATCACACGATGTACTCATTCATAGCT
GTCCAGATCCTCACATTATTGCAGTTCGGAGGATACACTCTTGTTAGGAATTCAAAGGAC
TTGTTTCAGAGTTTTGGGTTTGATACCCAACCAGTTCTTATTGGACTTATCATATTTCAG
CACACTGTCATACCTCTCCAGCACCTGGTGAGCTTTGGTCTTAATCTTGTAAGCCGTGCT
TTTGAGTTCCAGGCTGATGCTTTTGCAAAGAAGCTTGGTTATGCTGCAGCACTTCGAGCT
GGTCTTGTGAAACTGCAGGAAGAAAACTTGTCAGCTATGAACACAGATCCCTGGTATTCG
GCTTATCATTATTCTCACCCTCCTCTAGTTGAAAGATTGACTGCGATTGATGAACACGAC
AAGAAGACAGATTGA

Peptide Sequence

PEP ID

XP_016506684.1
PEP Infomation

PREDICTED: CAAX prenyl protease 1 homolog [Nicotiana tabacum]
Sequence

MAFPYLESVVGFMILMYIFETYLDLRQHAALKLPTLPKPLEGVICQEKFKKSQAYSLDKS
NFHFVHEFVTILMDSAVLYFRILPWFWKISGDFLIYLGLNAENEIFHTLAFLAGVMVWSQ
ITDLPFSLYSTFVIESRHGFNKQTVWLFFRDMIKGIALAIVIGPPIVAAIIFIVQKGGPY
LAIYLWGFMLVLSLVMMTLYPILIAPLFNKFTPLPEGELSSKIENLASSLKFPLKKLFVV
DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEVVAVIAHELGHWKLNHTMYSFIA
VQILTLLQFGGYTLVRNSKDLFQSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA
FEFQADAFAKKLGYAAALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLTAIDEHD
KKTD

Transcript Sequence

Gene sequence data has not been registered.